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PDBsum entry 3g3f

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3g3f calculated with MOLE 2.0 PDB id
3g3f
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.47 1.47 17.5 -0.70 -0.26 9.1 87 0 2 2 3 1 0 0  GLU 260 B NA 263 B
2 1.48 1.53 21.5 -0.90 -0.13 13.4 83 1 2 2 5 1 0 0  GLU 260 B NA 263 B
3 1.36 1.64 29.6 -1.64 -0.49 18.3 89 1 4 4 2 1 0 0  GLU 260 B
4 1.38 1.66 33.6 -1.54 -0.33 19.4 85 2 4 4 4 1 0 0  GLU 260 B
5 1.32 3.09 17.0 -0.23 -0.23 7.8 87 0 2 2 3 1 0 0  GLU 260 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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