spacer
spacer

PDBsum entry 3g0f

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3g0f calculated with MOLE 2.0 PDB id
3g0f
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 2.30 42.5 -1.31 -0.35 19.1 81 3 4 5 4 2 0 1  B49 9001 B
2 2.04 1.95 69.4 -1.32 -0.22 19.6 79 8 4 4 3 2 2 0  
3 1.80 1.82 102.5 -1.49 -0.19 20.0 78 9 4 3 5 3 3 0  
4 1.81 1.82 119.5 -1.57 -0.36 16.5 83 5 3 4 7 2 2 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer