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PDBsum entry 3fyl

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Top Page protein dna_rna ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3fyl calculated with MOLE 2.0 PDB id
3fyl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.22 19.0 -0.04 -0.27 10.0 79 1 1 1 3 0 0 3  
2 1.18 1.23 19.4 0.29 -0.16 8.2 79 1 1 1 3 0 0 3  
3 1.23 1.59 19.8 0.09 -0.19 9.3 79 1 1 1 3 0 0 3  
4 1.22 1.52 20.2 0.29 -0.13 8.5 79 1 1 1 3 0 0 3  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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