PDBsum entry 3fxc

Tunnel analysis for: 3fxc calculated with

MOLE 2.0

PDB id

3fxc

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

View options

MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

7 tunnels, coloured by tunnel radius

6 tunnels, coloured by tunnel radius

6 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.19

1.19

24.6

1.49

0.49

4.0

82

1

2

1

8

1

1

2

2

1.19

1.20

26.1

0.64

0.08

3.8

79

1

3

1

5

2

1

2

3

1.19

1.19

26.4

1.16

0.37

2.9

82

0

1

2

7

2

1

2

4

1.20

1.20

32.5

0.53

0.11

7.0

79

3

2

0

6

1

2

2

5

1.19

1.19

33.3

1.88

0.71

5.4

80

2

2

0

10

1

1

2

6

1.15

1.89

34.2

2.37

0.77

2.1

79

0

1

0

10

1

1

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.