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PDBsum entry 3fvq

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3fvq calculated with MOLE 2.0 PDB id
3fvq
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.62 4.37 30.2 -2.79 -0.51 29.8 81 4 7 2 1 0 3 0  
2 1.95 4.24 31.2 -2.29 -0.47 25.4 85 7 4 3 0 0 2 0  
3 1.89 4.12 31.2 -2.19 -0.48 26.2 87 7 5 3 1 0 2 0  
4 2.53 2.55 32.3 -1.59 -0.40 22.1 83 4 5 3 3 0 2 0  
5 1.34 1.52 34.5 -2.61 -0.48 28.1 81 5 6 2 1 0 3 0  
6 1.81 2.42 34.9 -1.30 -0.51 16.1 82 4 3 3 2 2 0 0  ATP 401 A
7 1.40 1.42 40.6 -1.78 -0.47 23.8 85 5 4 4 3 0 2 0  
8 1.54 2.77 45.3 -1.68 -0.57 16.9 80 3 4 4 5 1 0 0  ATP 360 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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