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PDBsum entry 3fvk
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Tunnel analysis for: 3fvk calculated with  MOLE 2.0
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PDB id
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3fvk
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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15 tunnels,
coloured by
tunnel radius
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15 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.45 |
1.83 |
16.0 |
-1.14 |
-0.53 |
17.1 |
83 |
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3 |
2 |
1 |
0 |
1 |
0 |
0 |
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GOL 3968 A
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2 |
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1.39 |
1.84 |
16.7 |
-2.04 |
-0.36 |
29.1 |
80 |
3 |
2 |
1 |
0 |
2 |
0 |
0 |
GOL 3968 A
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3 |
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1.39 |
1.85 |
21.8 |
-1.34 |
-0.48 |
22.0 |
91 |
2 |
2 |
2 |
0 |
1 |
0 |
0 |
GOL 3968 A
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4 |
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1.40 |
1.83 |
22.7 |
-0.05 |
0.03 |
12.7 |
87 |
3 |
1 |
2 |
1 |
2 |
0 |
0 |
GOL 3968 A GOL 3975 A
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5 |
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1.31 |
2.18 |
25.1 |
-1.79 |
-0.68 |
21.7 |
89 |
3 |
2 |
3 |
1 |
0 |
0 |
0 |
GOL 3968 A GOL 3971 A
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6 |
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1.46 |
1.67 |
24.1 |
-0.69 |
-0.31 |
12.5 |
81 |
0 |
4 |
2 |
2 |
2 |
0 |
0 |
8DX 2 B
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7 |
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1.47 |
1.67 |
24.9 |
-1.26 |
-0.35 |
15.8 |
84 |
1 |
4 |
3 |
2 |
2 |
0 |
0 |
8DX 2 B
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8 |
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1.58 |
2.83 |
25.2 |
0.01 |
-0.10 |
14.4 |
92 |
0 |
4 |
4 |
4 |
1 |
0 |
0 |
8DX 2 B
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9 |
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1.55 |
1.55 |
25.4 |
0.02 |
-0.02 |
7.7 |
77 |
0 |
2 |
1 |
4 |
2 |
0 |
0 |
8DX 2 B
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10 |
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1.60 |
2.82 |
26.0 |
-0.39 |
-0.09 |
17.0 |
93 |
1 |
4 |
5 |
4 |
1 |
0 |
0 |
8DX 2 B
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11 |
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1.59 |
1.74 |
26.2 |
-0.44 |
-0.03 |
10.6 |
81 |
1 |
2 |
2 |
4 |
2 |
0 |
0 |
8DX 2 B
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12 |
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1.60 |
1.82 |
23.6 |
-0.81 |
-0.14 |
12.5 |
88 |
2 |
2 |
2 |
3 |
1 |
0 |
0 |
8DX 1 A
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13 |
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1.65 |
1.82 |
27.7 |
-0.89 |
-0.29 |
18.0 |
93 |
2 |
4 |
5 |
4 |
1 |
0 |
0 |
8DX 1 A
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14 |
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1.36 |
1.52 |
19.3 |
-2.00 |
-0.38 |
31.4 |
85 |
5 |
3 |
0 |
2 |
0 |
0 |
0 |
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15 |
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1.46 |
1.74 |
19.9 |
-1.83 |
-0.37 |
31.4 |
85 |
5 |
3 |
0 |
2 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program