PDBsum entry 3frd Go to PDB code:  Tunnel analysis for: 3frd calculated with MOLE 2.0 PDB id 3frd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.00 2.02 19.8 2.12 0.62 4.6 72 2 0 0 5 1 0 0  DHF 300 X NDP 301 X 2 1.91 2.03 23.5 1.59 0.32 2.1 85 0 1 2 5 1 0 0  DHF 300 X NDP 301 X 3 1.87 3.30 27.2 0.29 -0.18 5.3 87 1 2 2 5 1 0 0  DHF 300 X NDP 301 X Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.