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PDBsum entry 3fk2

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Pore analysis for: 3fk2 calculated with MOLE 2.0 PDB id
3fk2
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.86 3.96 29.5 -1.99 -0.30 26.3 79 6 6 2 2 2 3 0  
2 1.90 2.09 31.7 -0.87 -0.37 15.1 87 3 6 5 7 2 0 2  
3 3.25 3.66 42.9 -1.59 -0.53 23.2 89 2 10 4 5 2 2 0  
4 2.30 2.63 43.8 -0.68 -0.31 9.9 92 2 6 6 10 3 2 0  UNX 4 D
5 1.70 1.88 49.0 -0.88 -0.33 12.8 89 4 9 4 11 3 2 1  
6 1.36 2.10 50.2 -0.85 -0.29 13.4 87 4 8 3 10 3 2 0  
7 3.27 3.73 51.3 -1.65 -0.58 21.5 84 1 11 3 5 2 1 0  
8 1.92 2.11 52.8 -1.16 -0.40 18.9 91 5 7 6 10 3 2 2  
9 3.56 3.64 54.5 -2.14 -0.58 28.9 87 2 11 4 5 1 2 0  
10 3.27 3.74 65.1 -1.68 -0.55 19.7 78 6 12 3 3 4 4 0  
11 1.94 2.12 68.2 -1.25 -0.39 17.7 88 5 7 5 12 3 2 2  
12 3.70 4.83 68.3 -2.03 -0.56 25.6 82 7 12 3 3 3 5 0  
13 2.28 2.63 72.2 -1.31 -0.44 18.1 86 9 8 5 10 5 5 0  UNX 4 D
14 2.41 2.58 72.6 -1.26 -0.41 17.1 87 3 10 5 8 5 3 0  
15 1.89 2.14 74.8 -1.46 -0.44 20.3 83 11 10 3 10 5 5 1  
16 2.43 2.60 75.7 -1.60 -0.44 22.7 89 4 11 5 8 4 4 0  
17 1.92 2.10 78.3 -1.42 -0.44 18.7 83 10 8 5 9 5 5 2  
18 1.43 2.07 81.3 -1.49 -0.46 20.7 82 13 10 2 10 5 5 0  
19 1.90 2.13 90.8 -0.94 -0.32 14.3 90 6 7 9 17 6 4 2  UNX 4 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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