PDBsum entry 3fho

Tunnel analysis for: 3fho calculated with

MOLE 2.0

PDB id

3fho

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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without HETATM:

9 tunnels, coloured by tunnel radius

9 tunnels, coloured by tunnel radius

9 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.16

1.16

26.6

2.04

0.83

6.3

85

3

1

0

7

1

0

0

2

1.12

1.12

27.1

1.76

0.78

7.7

85

3

1

0

7

1

0

0

3

1.15

1.16

28.6

1.89

0.77

10.6

83

3

1

0

8

1

0

1

4

1.12

1.12

32.6

1.46

0.64

13.0

84

4

1

0

8

1

0

1

5

1.16

1.16

34.8

1.16

0.43

11.1

82

4

0

0

8

1

0

1

6

1.12

1.13

35.4

1.20

0.41

10.2

84

4

0

0

8

1

0

1

7

1.12

1.13

38.2

1.09

0.49

13.5

83

5

1

1

8

1

0

1

8

1.15

1.16

42.3

1.10

0.37

12.4

84

3

2

1

11

1

0

1

9

1.19

1.17

53.0

0.60

0.28

10.3

81

3

1

4

11

3

1

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.