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PDBsum entry 3fcu

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3fcu calculated with MOLE 2.0 PDB id
3fcu
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.47 31.9 -2.30 -0.45 21.8 78 5 2 1 0 1 2 0  
2 1.28 1.40 37.2 -1.33 -0.39 18.9 79 4 3 1 3 0 3 0  
3 1.27 1.38 38.8 -1.42 -0.37 17.5 79 4 1 2 3 0 4 0  
4 1.42 1.94 49.0 -2.01 -0.41 20.7 80 6 6 2 1 1 3 0  
5 1.43 1.94 50.7 -2.00 -0.41 19.9 79 6 4 3 2 1 4 0  
6 2.25 3.80 54.4 -1.90 -0.67 14.0 81 5 3 5 1 1 2 0  
7 2.09 2.90 56.3 -1.59 -0.42 20.3 84 7 3 7 3 1 4 0  
8 1.87 2.60 60.5 -1.38 -0.29 15.6 79 5 5 6 2 4 3 0  
9 1.62 2.59 76.0 -1.27 -0.42 18.3 85 5 3 4 7 1 2 0  
10 1.10 1.36 77.7 -1.35 -0.23 17.8 81 6 4 6 6 3 4 0  
11 1.14 1.36 80.2 -1.63 -0.35 19.2 80 7 4 5 5 1 6 0  
12 1.38 1.41 125.1 -1.63 -0.46 14.0 83 5 5 9 6 2 2 0  NAG 1 H NAG 2 H MAN 3 H
13 1.21 1.33 176.0 -1.33 -0.32 17.4 83 15 8 10 14 4 7 0  MG 458 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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