PDBsum entry 3f8u Go to PDB code:  Pore analysis for: 3f8u calculated with MOLE 2.0 PDB id 3f8u Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.46 1.53 34.7 -1.43 -0.52 18.8 83 5 6 2 1 1 2 0   2 1.45 1.52 45.8 -1.65 -0.46 22.1 81 9 5 3 2 2 2 0   3 1.35 1.36 60.8 -0.79 -0.50 10.4 87 2 5 5 5 0 1 0   4 1.84 2.40 123.4 -2.25 -0.57 23.7 76 7 12 3 2 2 9 0   5 2.11 2.38 135.1 -2.03 -0.55 24.1 79 9 13 4 4 1 9 0   6 1.86 2.31 150.6 -2.09 -0.53 21.6 76 12 11 6 4 3 8 0   7 1.47 1.52 161.0 -1.80 -0.50 17.9 75 10 11 7 4 3 10 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.