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PDBsum entry 3f7u

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3f7u calculated with MOLE 2.0 PDB id
3f7u
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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15 tunnels, coloured by tunnel radius 16 tunnels, coloured by tunnel radius 16 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.54 22.2 -0.59 -0.29 13.9 84 2 2 1 3 0 1 0  
2 1.54 27.2 -1.05 -0.36 19.0 82 3 3 1 3 0 1 0  
3 1.62 36.7 -1.92 -0.39 23.4 79 6 2 2 4 0 2 0  
4 1.60 46.8 -1.12 -0.11 17.9 78 5 3 4 6 1 3 0  
5 1.60 51.4 -1.21 -0.22 17.7 80 5 2 3 7 1 3 0  
6 1.61 53.9 -1.57 -0.38 18.9 78 4 4 3 9 1 4 0  
7 1.60 54.7 -0.58 -0.10 14.2 80 5 2 3 7 1 3 0  
8 1.77 55.6 -1.70 -0.39 18.5 77 4 4 3 8 1 4 0  
9 1.60 58.2 -1.39 -0.23 17.6 77 5 3 3 9 1 4 0  
10 1.60 60.2 -2.23 -0.57 21.6 79 6 5 5 4 0 3 0  
11 2.04 6.7 -2.01 -0.31 19.7 93 3 0 4 0 1 0 0  268 AG4 D
12 1.40 7.8 -1.13 -0.07 19.3 71 2 0 0 2 1 0 0  
13 1.28 4.4 -2.38 0.07 19.9 68 1 0 1 0 2 1 0  
14 1.31 27.4 -1.57 -0.49 15.6 72 2 2 2 1 1 0 1  
15 1.60 6.1 -2.93 -0.76 36.4 79 1 2 0 0 0 0 0  
16 3.08 4.5 -0.46 -0.68 8.3 95 0 1 1 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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