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PDBsum entry 3f7f

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 3f7f calculated with MOLE 2.0 PDB id
3f7f
Pores calculated on whole structure Pores calculated excluding ligands

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15 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.39 32.9 -1.41 -0.29 19.1 82 3 3 5 2 4 0 0  
2 1.25 1.36 52.9 -1.74 -0.31 20.4 81 5 5 6 4 4 0 0  
3 1.24 2.11 66.6 -0.60 -0.36 17.6 81 2 7 5 4 3 0 1  HG 803 A
4 2.22 2.37 91.7 -1.75 -0.18 19.8 77 6 6 4 4 5 2 0  
5 2.10 2.66 95.5 -1.60 -0.48 21.2 82 5 8 2 6 4 0 0  
6 1.61 2.96 97.3 -1.34 -0.28 17.1 79 8 7 7 5 7 1 0  
7 1.65 2.77 116.8 -1.14 -0.56 18.9 90 5 9 9 6 2 0 0  
8 1.68 2.95 145.7 -1.17 -0.27 19.2 79 10 9 8 7 8 2 0  
9 1.23 1.52 153.4 -1.66 -0.24 19.2 79 13 10 11 8 10 1 0  
10 1.74 2.91 176.5 -1.35 -0.45 19.2 87 9 12 14 6 6 1 0  
11 1.19 1.47 221.1 -1.24 -0.30 16.8 79 11 16 17 12 13 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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