PDBsum entry 3f78 Go to PDB code:  Tunnel analysis for: 3f78 calculated with MOLE 2.0 PDB id 3f78 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.57 17.2 -1.24 -0.56 17.2 83 3 2 2 1 2 0 0   2 1.27 1.64 17.5 -1.08 -0.31 21.4 87 3 1 2 1 1 0 0   3 1.34 1.71 18.5 -1.11 -0.58 15.1 83 3 1 2 1 2 0 0   4 1.29 1.64 18.8 -1.15 -0.61 15.6 89 3 2 2 2 1 0 0   5 1.26 1.56 21.1 -1.61 -0.56 21.5 84 4 2 3 1 2 0 0   6 1.22 1.63 22.7 -1.49 -0.58 19.8 88 4 2 3 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.