spacer
spacer

PDBsum entry 3f71

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 3f71 calculated with MOLE 2.0 PDB id
3f71
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
11 tunnels, coloured by tunnel radius 11 tunnels, coloured by tunnel radius 11 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.68 9.3 -1.20 -0.33 24.7 67 2 1 0 1 1 0 0  
2 1.80 9.4 -0.51 -0.17 19.5 67 2 1 0 1 1 0 0  
3 1.61 9.6 -0.30 -0.15 20.1 63 2 1 0 1 1 0 0  
4 1.61 13.7 -0.61 -0.17 24.7 64 1 2 0 2 1 0 0  
5 2.06 1.9 0.92 0.23 14.6 84 0 1 0 3 0 0 0  
6 2.10 3.8 0.74 -0.11 1.7 89 0 0 1 3 0 0 0  
7 1.94 6.3 0.58 -0.21 6.7 81 1 0 0 3 0 1 0  
8 1.66 10.8 0.53 -0.34 5.9 84 0 1 0 3 0 0 0  
9 1.95 9.5 -0.07 0.04 9.1 69 1 1 0 2 1 1 0  
10 1.41 13.3 -0.29 0.07 17.3 72 1 2 0 2 1 0 0  
11 1.79 3.8 -1.16 -0.67 2.8 108 0 0 2 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer