PDBsum entry 3f6x

Pore analysis for: 3f6x calculated with

MOLE 2.0

PDB id

3f6x

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

6 pores, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.75

4.45

39.3

-0.56

-0.28

11.5

79

1

4

4

3

2

2

1

2

3.46

3.46

47.4

-0.93

-0.21

14.2

74

2

5

5

3

4

2

1

3

2.37

2.54

49.7

-2.45

-0.72

25.3

80

5

6

4

1

1

1

0

IHH 1 A

4

2.21

2.35

51.8

-1.94

-0.47

21.6

78

4

5

4

2

2

3

0

5

2.75

4.42

58.5

-1.41

-0.43

15.8

79

3

9

8

3

3

4

1

6

2.22

2.36

61.8

-1.65

-0.56

16.3

80

5

7

6

2

1

3

1

7

2.15

2.14

73.1

-0.87

-0.24

17.4

78

4

5

3

4

2

2

1

IHH 1 A

8

2.75

4.45

88.0

-1.62

-0.58

19.5

79

5

9

7

4

2

2

1

IHH 1 A

9

1.78

1.81

122.4

-2.42

-0.66

25.2

78

9

13

6

1

3

4

0

IHH 1 A

10

2.91

3.84

121.8

-2.33

-0.65

27.4

79

9

11

9

3

3

4

0

IHH 1 A

11

1.98

2.14

142.6

-1.88

-0.40

19.8

79

8

8

8

4

4

4

0

12

2.75

4.17

151.9

-2.33

-0.63

25.2

79

8

15

8

2

4

6

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.