PDBsum entry 3f3t Go to PDB code:  Tunnel analysis for: 3f3t calculated with MOLE 2.0 PDB id 3f3t Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.23 25.1 -0.17 0.34 14.5 76 2 2 1 5 2 0 0  1AU 1 A 2 1.12 1.24 33.0 1.57 0.37 4.2 77 1 2 0 11 4 0 0  1AU 1 A 1AU 534 A 3 1.58 1.58 20.5 0.14 -0.09 13.5 80 2 1 1 6 1 0 1   4 1.57 1.59 20.7 1.43 0.32 5.3 79 1 0 0 7 2 0 0   5 1.58 1.59 26.5 0.49 0.02 11.4 78 1 2 1 7 1 0 1   6 1.29 1.51 47.3 0.70 0.09 11.2 82 2 2 2 11 2 0 0   7 1.22 1.22 19.7 -0.10 -0.15 6.5 68 1 1 1 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.