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PDBsum entry 3f2c

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Pore analysis for: 3f2c calculated with MOLE 2.0 PDB id
3f2c
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.41 27.5 -1.74 -0.68 24.2 81 3 4 1 1 1 1 0  DG 11 P DC 13 P DC 5 T DG 6 T DG 7 T DT 8 T
2 1.57 1.57 46.7 -2.43 -0.77 21.3 84 2 1 3 0 0 1 0  DA 1 T DT 2 T DA 3 T DA 4 T DC 5 T DG 6 T
3 1.70 1.70 64.8 -2.39 -0.54 30.2 89 10 2 1 0 0 1 0  DC 16 P DC 17 P DA 1 T DT 2 T DA 3 T DA 4 T DC 5
T DG 6 T DG 7 T
4 1.26 1.44 109.9 -1.22 -0.17 21.2 78 9 8 5 11 5 4 0  DC 16 P
5 1.20 1.43 124.4 -0.66 -0.22 17.6 78 10 8 3 12 1 3 0  DG 5 P DC 13 T DG 14 T
6 2.18 2.18 31.0 -0.54 -0.68 5.0 83 2 0 2 2 1 3 0  DA 8 P DC 9 P DC 16 T DT 17 T DC 18 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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