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PDBsum entry 3f1s

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3f1s calculated with MOLE 2.0 PDB id
3f1s
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 2.34 48.1 -0.46 0.10 20.5 76 6 4 0 9 1 1 0  
2 1.19 2.09 49.4 -0.44 0.03 18.9 78 6 3 2 10 2 1 0  
3 1.23 2.05 18.3 1.29 0.64 6.5 53 1 0 0 5 1 2 0  
4 1.56 1.84 16.6 -0.22 -0.36 6.7 75 0 2 0 1 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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