PDBsum entry 3eo1

Pore analysis for: 3eo1 calculated with

MOLE 2.0

PDB id

3eo1

Pores calculated on whole structure

Pores calculated excluding ligands

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11 pores, coloured by radius

11 pores, coloured by radius

11 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.06

2.19

26.6

-0.23

-0.18

8.2

80

3

1

3

2

0

2

0

2

1.61

3.63

30.9

0.72

0.22

5.6

66

1

2

0

6

2

5

0

3

1.18

1.93

45.7

-0.90

-0.59

8.4

89

2

2

6

1

0

2

1

4

1.62

3.54

51.7

0.10

0.05

9.6

71

3

3

1

6

3

5

0

5

1.19

1.95

128.1

-1.07

-0.46

11.2

84

4

5

13

5

2

5

2

6

1.19

1.18

181.8

-1.10

-0.51

12.3

84

2

8

15

8

4

5

2

7

1.19

3.10

74.5

-0.24

-0.16

7.6

87

2

2

9

4

3

1

0

8

1.19

3.10

74.4

-0.24

-0.16

7.6

87

2

2

9

4

3

1

0

9

1.15

1.14

90.2

-0.74

-0.55

8.1

91

3

3

8

5

2

1

0

10

1.94

2.04

25.7

-0.71

-0.31

9.0

77

0

2

2

2

1

1

0

11

1.77

1.85

61.7

-1.02

-0.65

8.7

97

2

3

5

2

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.