spacer
spacer

PDBsum entry 3ens

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3ens calculated with MOLE 2.0 PDB id
3ens
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.23 21.7 -0.80 -0.64 11.9 87 2 3 3 2 0 0 1  NA 303 D
2 1.25 1.34 33.2 -1.08 -0.68 11.5 86 2 3 5 2 0 0 2  ENS 301 D
3 1.22 1.51 35.0 -0.89 -0.55 8.6 81 2 2 5 2 1 1 2  ENS 301 D
4 1.24 1.54 40.9 -1.17 -0.23 11.1 78 2 4 4 2 3 0 1  ENS 301 D
5 1.21 1.21 25.4 -0.94 -0.75 9.7 63 1 2 1 0 2 0 0  ENS 301 B NA 303 B
6 1.35 1.79 16.0 -0.23 0.39 8.8 76 1 2 4 3 2 1 1  
7 1.25 1.25 19.6 -0.71 -0.34 13.2 81 2 1 2 3 0 0 1  
8 1.22 1.23 25.4 -0.74 -0.36 15.1 80 2 2 2 3 0 0 1  
9 1.20 1.52 27.5 -0.92 -0.35 17.2 73 3 3 2 2 1 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer