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PDBsum entry 3e8n
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Tunnel analysis for: 3e8n calculated with  MOLE 2.0
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PDB id
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3e8n
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.64 |
1.75 |
24.4 |
-1.96 |
-0.52 |
21.2 |
87 |
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4 |
3 |
3 |
1 |
1 |
0 |
0 |
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2 |
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1.64 |
1.75 |
26.8 |
-0.67 |
-0.38 |
13.2 |
94 |
1 |
2 |
3 |
2 |
1 |
0 |
0 |
VRA 1001 A
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3 |
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1.65 |
1.76 |
31.1 |
-0.84 |
-0.21 |
17.0 |
90 |
2 |
3 |
3 |
4 |
2 |
0 |
0 |
VRA 1001 A
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4 |
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1.16 |
1.41 |
49.1 |
0.23 |
-0.06 |
9.7 |
83 |
1 |
3 |
4 |
7 |
3 |
0 |
1 |
VRA 1001 A
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5 |
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0.99 |
2.69 |
19.9 |
0.16 |
0.27 |
2.5 |
64 |
1 |
0 |
0 |
3 |
2 |
3 |
0 |
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6 |
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1.16 |
1.39 |
15.8 |
-1.57 |
-0.63 |
20.1 |
88 |
2 |
2 |
2 |
2 |
0 |
0 |
0 |
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7 |
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1.15 |
1.38 |
17.8 |
-1.23 |
-0.51 |
18.7 |
84 |
2 |
2 |
2 |
2 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program