spacer
spacer

PDBsum entry 3e4z

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3e4z calculated with MOLE 2.0 PDB id
3e4z
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 2.37 106.5 -0.28 -0.03 13.3 84 8 5 11 15 6 1 0  
2 1.16 1.26 15.8 0.95 0.59 8.9 73 1 3 0 6 2 0 0  
3 1.36 1.42 16.2 -0.29 -0.43 9.8 78 1 2 1 2 1 0 0  
4 1.93 3.33 17.2 1.15 0.43 11.6 83 0 2 0 6 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer