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PDBsum entry 3e42

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3e42 calculated with MOLE 2.0 PDB id
3e42
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.62 7.4 0.48 0.77 10.3 73 1 1 0 2 1 0 0  
2 1.32 18.0 3.20 1.06 0.7 71 0 0 1 9 2 0 0  
3 1.34 12.7 -0.74 -0.16 10.9 74 1 1 1 3 2 1 0  
4 1.34 14.1 -0.55 -0.14 10.5 77 1 1 2 3 2 1 0  
5 1.42 6.0 -1.83 -0.34 26.8 80 1 2 1 0 1 0 0  
6 1.54 9.6 -1.10 -0.20 13.6 70 1 0 0 2 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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