 |
PDBsum entry 3e2f
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3e2f calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3e2f
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
3 tunnels,
coloured by tunnel radius |
|
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.23 |
1.33 |
46.9 |
-0.58 |
0.11 |
2.2 |
59 |
|
0 |
0 |
3 |
2 |
12 |
1 |
0 |
|
LLP 281 A GOL 456 A GOL 457 A
|
 |
|
2 |
 |
1.24 |
1.33 |
50.0 |
-0.65 |
0.25 |
5.2 |
66 |
2 |
1 |
4 |
3 |
11 |
0 |
0 |
LLP 281 A GOL 456 A GOL 457 A
|
|
3 |
 |
1.22 |
1.35 |
52.6 |
-1.16 |
0.07 |
9.0 |
65 |
1 |
2 |
6 |
2 |
12 |
1 |
0 |
LLP 281 A GOL 456 A GOL 457 A
|
|
4 |
 |
1.19 |
1.37 |
53.3 |
0.07 |
0.46 |
2.6 |
63 |
1 |
0 |
2 |
5 |
12 |
0 |
0 |
LLP 281 A GOL 456 A GOL 457 A
|
|
5 |
 |
1.56 |
2.07 |
45.5 |
-0.50 |
0.13 |
3.4 |
68 |
0 |
1 |
3 |
3 |
7 |
2 |
0 |
LLP 281 B GOL 456 B GOL 457 B
|
|
6 |
 |
1.58 |
2.03 |
47.8 |
-1.13 |
0.02 |
10.0 |
73 |
1 |
2 |
7 |
4 |
7 |
2 |
0 |
LLP 281 B GOL 456 B GOL 457 B
|
 |
7 |
 |
1.17 |
1.31 |
18.6 |
-0.76 |
0.03 |
26.4 |
77 |
2 |
2 |
0 |
4 |
0 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program