PDBsum entry 3dw8 Go to PDB code:  Pore analysis for: 3dw8 calculated with MOLE 2.0 PDB id 3dw8 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.70 2.94 25.5 -1.81 -0.43 29.0 82 5 6 1 3 1 0 0   2 1.97 2.59 30.4 -1.97 -0.38 22.6 76 5 4 1 1 2 1 0   3 1.56 1.71 31.1 -0.88 -0.01 16.5 78 3 3 1 4 1 1 0   4 1.27 1.49 31.5 -1.82 -0.52 21.8 86 6 3 4 3 1 0 1   5 1.40 1.40 33.3 -2.06 -0.38 30.2 79 5 6 1 3 1 1 0   6 1.51 1.72 37.8 -1.06 -0.08 17.5 79 4 3 3 3 1 1 0   7 1.48 2.08 41.5 -1.34 -0.33 21.2 78 3 7 2 4 2 0 0   8 1.62 2.80 44.1 -1.91 -0.46 21.4 80 3 6 5 1 2 0 0   9 1.68 2.84 49.4 -2.81 -0.45 39.3 78 8 7 2 1 1 2 1   10 1.68 2.57 56.3 -2.48 -0.46 36.1 80 11 8 1 3 0 1 1   11 1.57 2.82 58.5 -2.72 -0.42 34.6 77 10 7 3 1 2 1 1   12 1.46 2.06 63.4 -1.35 -0.46 22.8 79 5 7 3 7 2 1 0   13 1.50 1.60 67.7 -2.04 -0.32 31.8 75 11 8 1 4 1 2 1   14 1.58 1.75 69.9 -1.69 -0.27 30.4 74 11 8 0 5 2 2 1   15 1.59 1.66 27.1 -2.14 -0.70 18.5 77 4 2 4 1 2 0 0   16 2.13 2.14 25.9 -1.01 0.15 15.5 74 4 0 2 4 3 0 1  DAL 1 H ACB 3 H 1ZN 5 H FGA 6 H DAM 7 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.