PDBsum entry 3dw8 Go to PDB code:  Tunnel analysis for: 3dw8 calculated with MOLE 2.0 PDB id 3dw8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.51 19.4 1.83 0.85 3.7 75 2 0 2 4 3 0 0   2 1.44 1.50 23.8 -1.15 -0.53 21.3 86 2 4 2 2 0 0 0   3 1.10 2.24 26.4 2.88 0.73 0.8 73 0 0 1 13 0 1 0   4 1.25 1.25 25.9 -0.27 -0.25 13.1 81 3 2 2 6 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.