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PDBsum entry 3dvb

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Cleft analysis for: 3dvb PDB id
3dvb
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2189.95 2.21 61.75 7 12.33 1 15.13 1 7 4 3 3 4 8 0  
2 990.14 0.00 72.01 2 9.20 3 8.42 3 5 3 4 11 4 3 0  
3 997.31 0.00 64.58 4 8.18 4 7.62 7 6 3 6 2 2 6 0  
4 834.89 0.00 58.64 9 5.08 8 7.98 4 5 2 2 3 5 1 0  
5 739.55 0.00 68.33 3 7.20 6 7.41 8 6 4 5 6 1 2 0  
6 437.91 0.00 74.07 1 8.06 5 8.58 2 4 1 2 2 1 4 0  
7 448.88 0.00 50.62 10 3.80 9 7.97 5 3 2 2 3 0 4 0  
8 386.86 0.00 62.70 6 12.02 2 7.90 6 1 2 5 2 2 0 0  
9 367.45 0.00 64.20 5 6.70 7 6.20 9 2 3 2 3 3 2 0  
10 303.33 0.00 60.96 8 2.74 10 5.91 10 2 4 4 1 0 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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