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PDBsum entry 3dt1

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Cleft analysis for: 3dt1 PDB id
3dt1
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 12170.67 6.41 65.89 2 12.46 1 20.45 1 29 24 30 56 18 18 1 P40 361[A] (32 atoms)
2 1900.12 0.00 62.31 5 9.44 3 8.78 4 8 3 8 5 5 4 0  
3 799.88 0.00 62.62 4 9.68 2 8.80 3 4 2 4 5 3 1 0  
4 718.45 0.00 67.22 1 8.88 4 7.72 7 2 3 2 6 1 4 0  
5 597.38 0.00 63.30 3 7.43 6 8.75 5 1 3 4 5 2 1 2  
6 458.58 0.00 54.49 10 5.57 9 9.28 2 3 1 6 2 0 0 0  
7 311.34 0.00 60.52 8 6.15 7 7.73 6 1 0 3 6 2 0 0  
8 290.67 0.00 61.23 6 7.95 5 6.44 9 5 1 0 3 1 0 0  
9 232.45 0.00 59.77 9 5.96 8 6.72 8 1 3 1 1 0 0 0  
10 231.19 0.00 60.80 7 3.83 10 5.82 10 2 2 1 1 2 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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