PDBsum entry 3dog Go to PDB code:  Pore analysis for: 3dog calculated with MOLE 2.0 PDB id 3dog Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 2.47 41.8 -1.98 -0.50 30.0 85 8 6 1 3 0 0 0  SGM 1 B 2 1.65 2.90 46.3 -0.95 -0.20 21.4 82 5 6 3 6 1 1 0   3 1.24 1.24 52.2 -1.40 -0.43 23.4 87 6 5 2 5 0 1 0  SGM 1 B 4 1.25 1.25 55.9 -1.59 -0.40 23.9 88 7 5 3 3 0 1 0   5 1.32 3.38 65.9 -2.59 -0.59 28.8 82 13 4 5 2 0 1 0  SGM 1 B SGM 1 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.