PDBsum entry 3dk6 Go to PDB code:  Tunnel analysis for: 3dk6 calculated with MOLE 2.0 PDB id 3dk6 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.41 17.4 -0.38 -0.20 11.2 83 2 2 1 1 2 1 0   2 1.45 2.19 22.7 1.86 0.68 5.3 80 1 2 1 6 2 0 0  SX7 1 A 3 1.26 1.50 15.8 1.89 0.49 1.0 78 0 0 0 7 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.