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PDBsum entry 3dhu

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 3dhu calculated with MOLE 2.0 PDB id
3dhu
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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18 tunnels, coloured by tunnel radius 18 tunnels, coloured by tunnel radius 18 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.52 15.9 -2.26 -0.33 28.9 78 3 2 2 1 1 0 0  
2 1.54 16.2 -1.88 -0.42 24.0 72 3 2 2 1 2 0 0  
3 1.50 24.8 -2.35 -0.37 30.2 78 3 4 2 2 1 0 0  
4 3.69 5.5 -0.30 -0.43 10.4 89 1 1 2 2 0 0 0  
5 1.72 14.2 -1.18 0.15 14.5 76 2 0 0 3 2 0 0  
6 1.72 14.3 -1.70 0.17 18.7 78 3 0 1 2 2 0 0  
7 1.71 20.8 -1.12 0.22 13.8 77 3 1 0 3 2 0 0  
8 3.27 5.0 -1.48 -0.80 16.4 98 0 1 2 1 0 0 0  
9 1.56 13.4 -0.20 0.57 9.8 75 2 0 0 3 2 0 0  
10 1.58 15.1 -1.26 0.26 16.0 76 2 0 0 3 2 0 0  
11 1.48 9.6 -1.22 -0.69 8.5 76 1 1 3 2 1 0 0  
12 1.92 8.5 -1.99 -0.36 10.4 71 1 1 2 0 2 1 0  
13 1.57 9.0 -1.90 -0.64 16.1 84 1 1 3 2 0 0 0  
14 1.28 10.4 -1.34 0.02 2.2 75 0 0 2 0 2 1 0  
15 1.29 16.5 -1.06 -0.25 2.5 80 0 0 3 2 1 1 0  
16 2.23 9.5 -2.29 -0.78 15.1 91 1 1 2 1 0 0 0  
17 2.14 6.4 0.91 0.25 7.7 69 2 0 0 2 0 1 0  
18 1.54 6.8 -1.91 -0.53 23.6 75 1 2 1 1 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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