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PDBsum entry 3dft

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3dft calculated with MOLE 2.0 PDB id
3dft
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.61 34.8 -1.32 -0.55 12.1 91 5 3 4 1 0 2 0  
2 1.77 1.87 57.0 -1.34 -0.43 15.2 77 10 3 5 6 4 4 0  PO4 3004 D
3 1.16 1.16 74.0 -0.75 -0.39 11.0 78 10 3 7 11 4 4 0  
4 1.20 1.20 93.7 -0.31 -0.11 11.3 82 7 5 10 13 2 4 0  
5 1.18 1.19 96.0 -0.37 -0.24 10.4 80 10 5 10 15 4 4 0  
6 1.72 2.40 99.6 -0.63 -0.14 14.5 87 7 5 9 10 0 2 0  
7 1.23 1.74 115.6 -1.69 -0.56 15.4 85 7 3 8 4 0 3 0  
8 1.21 1.30 134.8 -1.28 -0.24 21.6 87 18 8 5 12 2 2 0  
9 1.31 1.34 133.4 -1.05 -0.40 13.2 82 14 4 11 14 4 3 0  
10 1.20 1.45 143.4 -1.26 -0.32 17.3 86 17 8 8 15 2 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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