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PDBsum entry 3dc5

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3dc5 calculated with MOLE 2.0 PDB id
3dc5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.30 25.4 0.97 0.23 9.0 77 1 2 2 8 0 0 0  
2 1.29 34.2 1.11 0.38 10.3 82 3 0 3 8 0 1 0  
3 1.82 6.2 0.02 -0.18 11.0 74 1 2 0 2 1 0 0  
4 1.51 22.0 -2.83 -0.40 36.0 91 2 2 2 1 0 0 0  
5 1.72 3.8 1.13 0.07 1.8 68 0 0 0 2 1 1 0  
6 1.61 7.7 -0.15 -0.15 7.5 77 2 0 0 2 1 0 0  
7 1.38 5.0 -2.33 -0.59 33.5 76 1 1 0 1 0 2 0  
8 1.96 3.6 0.74 0.00 5.8 82 1 0 0 2 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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