spacer
spacer

PDBsum entry 3dc5

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 3dc5 PDB id
3dc5
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 3251.39 2.36 64.20 2 11.57 1 11.29 1 13 7 12 16 1 5 1  
2 1375.73 0.00 58.82 7 8.31 3 7.12 5 7 3 4 7 1 3 1  
3 1178.30 0.00 56.85 8 5.81 8 7.96 3 5 4 2 5 2 4 0  
4 594.42 0.00 60.74 4 7.50 5 6.87 7 2 3 3 2 1 3 0  
5 569.11 0.00 62.52 3 7.13 6 7.29 4 2 3 3 2 1 3 0  
6 495.70 0.00 56.54 10 6.81 7 8.32 2 3 2 2 2 1 0 0  
7 524.39 0.00 56.73 9 4.12 10 5.90 8 2 3 2 4 2 3 0  
8 533.67 0.00 64.59 1 5.41 9 6.87 6 2 4 3 6 0 3 1  
9 380.53 0.00 59.50 6 9.29 2 5.38 9 0 0 4 4 0 1 1  
10 321.89 0.00 60.72 5 8.01 4 5.22 10 1 1 2 3 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer