PDBsum entry 3dbh Go to PDB code:  Pore analysis for: 3dbh calculated with MOLE 2.0 PDB id 3dbh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   20 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.96 3.79 83.8 -1.75 -0.48 19.5 77 4 11 6 6 2 6 0   2 1.90 1.92 84.3 -1.90 -0.45 22.6 80 6 6 7 8 2 3 0   3 1.18 1.46 91.8 -1.80 -0.40 21.1 84 10 3 9 4 3 2 0   4 1.68 2.95 99.5 -1.33 -0.46 20.1 77 6 12 6 7 2 4 0   5 1.49 1.63 99.8 -0.98 -0.27 15.7 76 7 10 5 10 1 7 0   6 1.16 1.36 112.9 0.08 -0.01 12.4 81 8 3 7 15 2 0 0   7 2.06 4.43 115.7 -1.93 -0.57 25.6 81 7 15 9 5 1 3 0   8 1.68 2.95 122.0 -2.28 -0.59 28.0 78 7 13 7 3 3 1 0   9 1.50 1.64 136.2 -1.56 -0.38 20.9 88 9 10 12 7 1 3 0   10 1.52 2.14 140.7 -1.20 -0.33 17.9 84 8 16 14 13 1 9 0   11 1.51 1.57 157.9 -1.34 -0.38 18.8 77 13 13 6 13 3 5 0   12 1.56 2.21 171.7 -1.83 -0.52 18.1 84 12 9 15 10 1 5 0   13 1.28 1.47 176.6 -1.64 -0.45 20.2 83 12 16 16 10 3 5 0   14 1.56 2.30 171.2 -1.56 -0.52 18.1 91 9 7 16 9 1 1 0   15 1.52 1.68 174.1 -1.81 -0.47 23.3 79 14 16 9 10 2 4 0   16 1.69 1.97 186.1 -1.79 -0.55 17.2 84 11 13 19 11 2 5 0   17 1.30 1.54 206.3 -1.77 -0.46 22.3 82 14 15 15 14 4 4 0   18 1.32 1.51 205.4 -1.63 -0.41 22.2 84 14 13 15 12 4 2 0   19 1.31 1.55 206.3 -1.57 -0.47 21.2 85 10 16 17 12 2 5 0   20 2.00 1.97 210.1 -1.61 -0.53 18.9 89 11 12 17 12 3 4 0   21 1.68 2.95 210.5 -1.31 -0.34 19.3 83 15 13 13 14 4 6 0   22 1.48 1.58 214.1 -1.28 -0.30 17.8 83 15 11 16 16 3 8 0   23 1.19 1.50 223.5 -1.49 -0.45 17.8 82 10 15 19 12 4 8 0   24 2.16 4.14 234.0 -1.75 -0.45 23.5 85 16 17 17 12 3 5 0   25 1.68 2.95 232.2 -1.34 -0.46 19.1 85 13 14 13 16 3 2 0   26 1.93 1.92 248.4 -1.73 -0.55 22.8 87 14 17 16 13 2 1 0   27 1.19 1.48 268.2 -1.35 -0.41 15.7 83 13 13 22 16 4 7 0   28 1.16 2.02 274.8 -1.11 -0.36 15.5 84 18 13 16 22 1 8 0   29 1.61 2.16 273.7 -1.20 -0.42 17.6 84 18 15 14 21 2 6 0   30 1.62 2.17 289.9 -1.48 -0.49 20.2 86 19 18 17 18 1 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.