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PDBsum entry 3dba

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3dba calculated with MOLE 2.0 PDB id
3dba
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.41 40.7 -0.18 0.05 13.2 80 3 3 2 8 3 0 0  35G 1 A
2 1.14 1.40 64.4 -0.33 0.00 14.8 81 4 5 4 11 5 0 0  35G 1 A
3 1.28 1.30 26.1 1.34 0.43 2.9 79 1 1 1 7 3 0 0  35G 2 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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