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PDBsum entry 3d9z

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Tunnel analysis for: 3d9z calculated with MOLE 2.0 PDB id
3d9z
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.81 7.2 -0.31 0.32 9.4 74 1 1 1 0 2 0 0  
2 1.44 8.4 -1.45 -0.80 18.9 81 1 2 1 1 0 0 0  
3 1.42 7.4 0.84 -0.08 1.9 91 0 0 1 4 0 0 0  
4 1.50 9.0 -0.77 0.63 20.1 55 1 1 0 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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