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PDBsum entry 3d9z

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Cleft analysis for: 3d9z PDB id
3d9z
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1927.55 1.67 57.11 9 11.71 2 12.15 1 7 5 5 2 4 7 0  
2 1153.41 0.00 71.67 1 8.42 4 7.91 4 5 3 7 11 6 2 0 D9Z 263[A] (16 atoms)
3 1012.08 0.00 60.71 6 7.49 5 7.20 8 6 3 6 2 2 6 0  
4 850.08 0.00 57.34 8 5.69 9 8.74 2 5 2 1 3 5 1 0  
5 877.50 0.00 55.55 10 6.73 7 7.34 7 3 2 3 5 1 5 0  
6 852.61 0.00 66.85 3 7.01 6 8.43 3 6 4 5 6 1 2 0  
7 531.98 0.00 69.73 2 12.30 1 7.78 5 4 1 2 2 1 4 0  
8 360.70 0.00 65.07 4 8.49 3 7.53 6 2 2 5 1 2 0 0  
9 356.06 0.00 59.55 7 3.22 10 6.49 9 2 4 4 1 0 1 0  
10 332.02 0.00 63.40 5 6.20 8 6.10 10 1 3 2 3 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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