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PDBsum entry 3d93

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Cleft analysis for: 3d93 PDB id
3d93
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2033.02 1.85 65.45 4 8.92 4 9.44 1 9 6 9 9 4 8 1  
2 1096.88 0.00 72.94 1 10.84 1 7.21 9 5 3 6 10 4 3 0 CO2 301[A] (3 atoms)
3 937.83 0.00 56.12 8 7.57 7 9.14 2 5 3 3 0 3 4 0  
4 772.88 0.00 63.38 5 8.38 5 7.78 7 1 3 2 2 3 4 0 GOL 303[A] (6 atoms)
5 483.47 0.00 52.93 10 5.15 8 8.32 3 2 2 2 3 0 3 0  
6 440.86 0.00 69.32 2 9.36 3 7.84 6 4 1 2 2 1 4 0  
7 458.58 0.00 61.80 6 7.77 6 7.51 8 2 3 2 3 3 2 0  
8 451.41 0.00 54.97 9 4.59 9 7.92 5 4 0 2 2 3 0 0  
9 377.58 0.00 65.71 3 10.79 2 8.11 4 2 2 4 2 2 0 0  
10 301.64 0.00 59.63 7 2.90 10 6.22 10 2 4 4 0 0 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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