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PDBsum entry 3d6t

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Protein chain B PDB id
3d6t
Protein chain B highlighted
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Jmol
Motifs
Secondary structure
Wiring diagram
Residue conservation
ProMotif
2 sheets
1 beta alpha beta unit
1 beta hairpin
1 psi loop
1 beta bulge
6 strands
4 helices
2 helix-helix interacs
15 beta turns
1 gamma turn
Catalytic residues
R1398
Variants
Ile1371Val
Arg1398His
Asp1375Glu
  
Chain (125 residues)

UniProt code: Q5S007 (LRRK2_HUMAN)   [Pfam]   [Ensembl gene]

structural classification (2 domains) :
Domain Links CATH no.   Class Architecture
1 3.30.70.1390 = Alpha Beta 2-Layer Sandwich
2 3.40.50.300 = Alpha Beta 3-Layer(aba) Sandwich

Key:  
Sec. struc: Helices labelled H1, H2, ... and strands by their sheets A, B, ...
  Helix Strand  
Motifs:   
    beta turn     gamma turn     beta hairpin
CSA annotation:   
    catalytic residue
Human variant:   
    variant residue
Residue contacts:   
    to ligand
PDB SITE records:   
 AC1  AC2

Jmol
RasMol

FASTA
file
Domain 1
Topology diagram


Hera


Domain 2
Topology diagram


Hera


  Analysis of sequence's residue conservation
  Related protein sequences in the PDB
  
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