PDBsum entry 3d2e Go to PDB code:  Pore analysis for: 3d2e calculated with MOLE 2.0 PDB id 3d2e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.61 3.63 33.2 -1.27 -0.48 14.9 87 3 2 5 3 0 1 0   2 2.31 4.92 35.5 -2.32 -0.59 23.9 81 5 5 5 1 3 0 0   3 1.89 1.89 35.8 -1.95 -0.23 26.1 80 7 4 4 3 2 0 0   4 2.31 4.92 45.9 -2.18 -0.67 21.5 84 6 5 6 1 2 0 0   5 1.50 1.78 46.8 -1.79 -0.29 26.1 82 8 5 3 4 1 0 0   6 1.21 1.40 49.0 -0.95 -0.19 13.2 74 5 3 2 1 3 4 1   7 2.02 2.25 52.1 -2.75 -0.47 29.4 80 9 6 6 1 3 1 0   8 2.02 2.25 54.9 -2.25 -0.54 24.0 87 8 4 7 2 2 0 0   9 2.05 2.78 94.0 -1.95 -0.50 26.9 81 7 9 3 5 1 2 0   10 1.38 1.55 111.4 -1.29 -0.26 19.9 76 7 9 4 6 5 3 0   11 1.36 2.05 126.2 -1.62 -0.48 18.3 85 13 6 12 5 4 3 0   12 1.27 1.97 132.1 -1.64 -0.52 19.4 88 14 4 8 7 3 2 0  GOL 2002 A 13 1.94 2.78 29.6 -1.82 -0.46 22.0 78 4 3 0 0 1 2 0   14 1.28 1.44 37.4 -0.72 0.01 11.8 73 3 3 1 3 5 3 0   15 1.25 1.44 37.5 -0.51 0.00 9.8 74 4 1 1 3 3 4 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.