PDBsum entry 3d1h Go to PDB code:  Tunnel analysis for: 3d1h calculated with MOLE 2.0 PDB id 3d1h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.73 1.91 15.6 -0.46 0.39 6.4 63 2 0 0 3 5 0 0   2 1.36 1.84 16.0 -0.70 0.42 7.7 63 2 0 0 3 5 0 0   3 1.20 2.14 16.4 -0.34 0.42 5.5 63 2 0 0 3 5 0 0   4 1.18 2.15 16.4 -0.62 0.46 7.4 63 2 0 0 3 5 0 0   5 1.69 1.93 23.1 -0.68 0.27 7.0 63 2 1 0 3 5 0 0   6 1.34 2.16 23.9 -0.57 0.32 6.6 63 2 1 0 3 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.