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PDBsum entry 3cxc

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Top Page protein dna_rna ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3cxc calculated with MOLE 2.0 PDB id
3cxc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.26 15.4 -1.36 -0.51 17.9 74 2 1 0 1 1 1 0  C 136 0 U 137 0 C 260 0 A 261 0
2 1.30 1.52 16.0 0.66 -0.16 5.6 89 0 1 1 4 0 0 0  
3 1.13 1.67 15.6 0.88 0.27 10.6 80 0 2 0 4 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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