PDBsum entry 3cob Go to PDB code:  Tunnel analysis for: 3cob calculated with MOLE 2.0 PDB id 3cob Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 1.71 19.8 -1.82 -0.42 11.7 90 2 1 7 1 2 0 0   2 1.30 1.30 17.4 -0.88 -0.74 7.5 97 2 0 3 3 0 1 0  ADP 600 C MG 602 C 3 1.30 1.30 23.0 -0.61 -0.51 10.6 89 2 2 4 3 1 1 1  ADP 600 C MG 602 C 4 1.30 1.30 37.4 -1.06 -0.53 10.6 84 3 2 5 3 2 3 0  ADP 600 C MG 602 C 5 1.30 1.38 15.7 -1.62 -0.56 6.3 86 4 0 6 2 1 2 0   6 1.31 1.40 24.2 -1.58 -0.65 7.1 86 5 2 7 2 1 3 0   7 1.19 1.40 19.7 0.54 0.30 12.3 91 4 0 6 6 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.