spacer
spacer

PDBsum entry 3co7

Go to PDB code: 
Top Page protein dna_rna links
Transcription/DNA PDB id
3co7
Contents
Protein chains
87 a.a.
DNA/RNA
Waters ×4

References listed in PDB file
Key reference
Title Structural basis for DNA recognition by foxo1 and its regulation by posttranslational modification.
Authors M.M.Brent, R.Anand, R.Marmorstein.
Ref. Structure, 2008, 16, 1407-1416. [DOI no: 10.1016/j.str.2008.06.013]
PubMed id 18786403
Abstract
FoxO transcription factors regulate the transcription of genes that control metabolism, cellular proliferation, stress tolerance, and possibly life span. A number of posttranslational modifications within the forkhead DNA-binding domain regulate FoxO-mediated transcription. We describe the crystal structures of FoxO1 bound to three different DNA elements and measure the change in FoxO1-DNA affinity with acetylation and phosphorylation. The structures reveal additional contacts and increased DNA distortion for the highest affinity DNA site. The flexible wing 2 region of the forkhead domain was not observed in the structures but is necessary for DNA binding, and we show that p300 acetylation in wing 2 reduces DNA affinity. We also show that MST1 phosphorylation of FoxO1 prevents high-affinity DNA binding. The observation that FoxO-DNA affinity varies between response elements and with posttranslational modifications suggests that modulation of FoxO-DNA affinity is an important component of FoxO regulation in health and misregulation in disease.
Figure 3.
Figure 3. Schematic Showing FoxO1 DBD Interactions with IRE and DBE1 DNA Sequences
(A and B) Differences in hydrogen bonding between the DBE and IRE sequences are highlighted in green. Bases that are contacted directly or through water-mediated interactions are shaded. Phosphates that are contacted directly or through water-mediated interactions are highlighted in red.
Figure 4.
Figure 4. Binding of FoxO1 DBD and Truncation Mutants to Cognate DNA Sites
(A–D) EMSA binding studies to IRE and DBE2 DNA using C-terminally truncated FoxO1 DBD constructs.
The above figures are reprinted from an Open Access publication published by Cell Press: Structure (2008, 16, 1407-1416) copyright 2008.
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer