PDBsum entry 3cf1 Go to PDB code:  Pore analysis for: 3cf1 calculated with MOLE 2.0 PDB id 3cf1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.45 2.61 26.9 -1.41 -0.24 25.0 87 5 3 1 4 0 0 0   2 2.38 3.23 34.5 -1.26 -0.40 11.4 81 6 1 3 2 0 3 0  ADP 900 C 3 1.97 2.83 43.5 -2.78 -0.44 27.8 82 6 3 5 3 0 4 0   4 2.47 2.48 43.7 -2.21 -0.52 17.5 79 7 3 6 4 1 3 0   5 1.59 1.75 44.0 -1.57 -0.43 18.3 87 6 3 4 4 1 1 0  ADP 807 B 6 1.46 1.46 44.3 -1.95 -0.28 24.3 82 9 2 3 3 1 2 0  ADP 807 B 7 1.29 1.43 52.7 -2.34 -0.55 24.1 87 10 4 5 4 0 2 0   8 1.30 1.46 53.2 -2.40 -0.58 26.9 79 8 8 3 3 0 4 0   9 1.71 1.81 71.7 -2.30 -0.53 35.3 85 10 12 4 8 0 0 0   10 1.27 2.78 79.4 -2.21 -0.42 24.0 85 9 5 6 3 2 3 0  ADP 900 B 11 1.25 2.70 82.9 -1.44 -0.24 17.7 74 6 7 5 6 4 6 0   12 2.40 2.54 87.3 -2.18 -0.50 22.4 88 12 4 8 4 0 3 0  ADP 900 C 13 1.22 2.68 89.3 -1.92 -0.46 21.2 80 8 7 5 4 1 4 0  ADP 900 B 14 2.18 2.38 107.5 -2.38 -0.55 26.9 84 15 10 10 6 1 3 0   15 1.27 1.45 110.2 -2.06 -0.48 23.9 84 14 8 6 6 2 5 0  ADP 900 C 16 1.18 1.19 151.9 -1.34 -0.38 15.4 83 13 6 12 13 1 3 0   17 1.19 1.20 200.7 -1.45 -0.43 19.5 84 15 14 12 15 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.