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PDBsum entry 3ccs

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 3ccs calculated with MOLE 2.0 PDB id
3ccs
Pores calculated on whole structure Pores calculated excluding ligands

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32 pores, coloured by radius 32 pores, coloured by radius 32 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 1.12 28.8 -0.94 -0.72 12.2 87 2 3 0 2 0 0 0  A 551 0 A 552 0 G 554 0 U 555 0 A 597 0 C 598 0
2 2.29 2.29 32.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 555 0 C 556 0 C 557 0 C 558 0 U 559 0 U 560 0 G
561 0 A 562 0 C 563 0 G 564 0 A 590 0 A 591 0 G
592 0 A 593 0 C 594 0 C 596 0 A 597 0 C 598 0
3 2.23 2.23 113.2 -1.10 -0.80 13.5 89 2 5 1 0 0 0 0  G 564 0 A 565 0 A 566 0 C 583 0 U 584 0 C 585 0 G
588 0 A 1133 0 G 1135 0 U 1136 0 G 1137 0 C 1153
0 A 1154 0 C 1208 0 U 1218 0 U 1219 0 U 1220 0 G
1221 0 A 1222 0 G 1223 0 G 1224 0 C 1251 0 A 1252
0 C 1253 0 C 1254 0 A 1255 0 G 88 9 C 89 9 G 92 9
C 95 9 C 96 9 U 97 9
4 2.85 2.85 131.3 -0.63 -0.76 4.2 85 1 2 2 0 0 1 0  G 564 0 A 565 0 G 740 0 C 741 0 U 909 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 C 933 0 C 934 0 G
1031 0 A 1032 0 C 1033 0 G 1034 0 C 1035 0 G 1036
0 G 1037 0 U 1266 0 C 1267 0 C 1268 0 G 1269 0 U
1270 0 A 1271 0 C 1272 0 U 1279 0 A 1280 0 C 1281
0 U 1282 0 G 1283 0 G 1284 0 U 1285 0 A 2395 0 C
2396 0 G 2397 0 A 2398 0 A 2430 0 C 2431 0 C 2432
0 U 2435 0 U 2436 0 A 2437 0 C 2439 0 G 2451 0 G
2452 0 G 2453 0 C 2454 0 A 2455 0 A 2456 0
5 1.19 1.18 132.2 -1.07 -0.78 10.9 78 5 5 1 1 1 1 0  A 11 0 U 12 0 G 13 0 C 14 0 C 15 0 A 16 0 G 17 0
C 18 0 U 19 0 G 20 0 A 519 0 A 520 0 U 522 0 C
523 0 A 524 0 G 525 0 U 526 0 U 548 0 A 549 0 C
550 0 A 551 0 A 552 0 G 553 0 G 554 0 G 604 0 A
1321 0 G 1322 0 G 1323 0 G 1337 0 A 2910 0 C 2911
0 SR 8973 0
6 1.59 1.59 141.4 -1.15 -0.78 13.5 88 5 5 4 2 0 0 0  C 40 0 G 41 0 U 43 0 G 44 0 U 46 0 A 49 0 G 77 0
G 78 0 G 79 0 C 101 0 A 102 0 C 103 0 A 104 0 G
105 0 A 106 0 U 107 0 U 108 0 U 299 0 U 300 0 C
301 0 A 302 0 C 303 0 G 304 0 A 305 0 A 306 0 C
344 0 G 345 0 A 352 0 G 353 0 A 354 0 C 443 0 C
444 0
7 2.36 2.36 152.4 -0.82 -0.79 8.0 82 3 3 2 0 0 0 0  G 13 0 C 14 0 C 530 0 G 531 0 A 536 0 C 538 0 G
539 0 A 540 0 C 541 0 A 542 0 G 543 0 U 555 0 C
556 0 C 557 0 U 595 0 C 596 0 A 597 0 C 598 0 G
607 0 A 608 0 U 609 0 U 611 0 U 612 0 C 613 0 U
614 0 A 2062 0 U 2063 0 C 2084 0 C 2086 0 C 2087
0 C 2651 0 U 2652 0 A 2653 0 C 2654 0 U 2655 0 G
2657 0 G 2658 0 U 2659 0 G 2660 0 U 2661 0 G 2662
0 G 2668 0 U 2669 0 A 2812 0 G 2829 0 C 2844 0 A
2910 0 C 2911 0 C 2912 0 A 2913 0
8 1.59 1.61 164.2 -0.97 -0.82 10.6 84 2 5 1 0 0 0 0  G 564 0 A 565 0 A 566 0 C 583 0 U 584 0 C 585 0 G
588 0 G 1100 0 U 1120 0 G 1121 0 U 1122 0 A 1124
0 G 1131 0 G 1226 0 C 1227 0 A 1230 0 A 1231 0 A
1232 0 A 1236 0 C 1238 0 U 1249 0 C 1250 0 C 1253
0 C 1254 0 A 1255 0 U 2550 0 C 2551 0 C 2552 0 G
2558 0 A 2577 0 G 2578 0 G 2679 0 A 2680 0 A 2681
0 G 2683 0 A 2684 0 C 2685 0 U 2705 0 A 2706 0 C
2707 0 C 2769 0 A 2800 0 A 2801 0 C 2802 0 C 2803
0 C 2804 0 A 2805 0 MG 8018 0 MG 8037 0 G 88 9 C
89 9 G 90 9 C 91 9
9 2.19 2.17 172.5 -1.58 -0.71 19.1 81 11 12 4 3 0 1 0  C 31 0 C 62 0 U 63 0 G 77 0 G 78 0 G 79 0 C 85 0
A 86 0 C 101 0 A 102 0 C 301 0 A 302 0 C 303 0 G
304 0 A 305 0 A 306 0 C 344 0 G 345 0 C 444 0 U
445 0 C 461 0 A 462 0 G 479 0 C 480 0 A 495 0 G
496 0 A 498 0 G 499 0 G 514 0 A 1390 0 G 1391 0 A
1392 0 A 1427 0 C 2831 0 A 2910 0 C 2911 0
10 2.25 2.25 168.1 -0.56 -0.80 5.9 90 1 2 1 0 0 0 0  A 542 0 G 543 0 C 558 0 U 559 0 G 561 0 A 562 0 C
563 0 G 564 0 A 590 0 A 591 0 G 592 0 A 593 0 C
594 0 G 615 0 U 616 0 G 1076 0 G 1077 0 A 1092 0
G 1093 0 G 1100 0 U 1101 0 C 1105 0 A 1106 0 U
1122 0 A 1123 0 A 1133 0 G 1135 0 U 1136 0 G 1137
0 C 1153 0 A 1154 0 C 1208 0 U 1218 0 U 1219 0 U
1220 0 G 1221 0 A 1222 0 G 1223 0 G 1224 0 G 1239
0 A 1248 0 U 1249 0 C 1250 0 C 1251 0 A 1252 0 C
1253 0 G 1258 0 A 1259 0 G 88 9 C 89 9 G 92 9 C
95 9 C 96 9 U 97 9
11 2.26 2.36 178.5 -0.90 -0.76 11.0 84 4 6 0 1 0 0 0  G 564 0 A 565 0 A 566 0 C 583 0 U 584 0 C 585 0 G
588 0 G 1100 0 G 1119 0 U 1120 0 G 1121 0 U 1122
0 A 1124 0 G 1131 0 G 1226 0 C 1227 0 C 1228 0 C
1229 0 A 1230 0 A 1231 0 U 1249 0 C 1250 0 C 1253
0 C 1254 0 A 1255 0 U 2499 0 C 2500 0 A 2553 0 U
2554 0 C 2555 0 C 2556 0 U 2557 0 G 2558 0 C 2560
0 A 2569 0 G 2570 0 C 2571 0 G 2572 0 G 2573 0 G
2574 0 C 2575 0 U 2598 0 A 2599 0 A 2600 0 C 2686
0 G 2687 0 U 2688 0 A 2776 0 MG 8037 0 G 88 9 C
89 9 G 90 9 C 91 9
12 1.59 1.61 180.0 -0.62 -0.80 5.5 86 2 2 3 0 0 1 0  G 13 0 C 14 0 C 530 0 G 531 0 A 536 0 C 538 0 G
539 0 A 540 0 C 541 0 A 542 0 G 543 0 U 555 0 C
556 0 C 557 0 U 595 0 C 596 0 A 597 0 C 598 0 G
607 0 A 608 0 U 609 0 U 611 0 U 612 0 C 613 0 U
614 0 G 1235 0 A 2062 0 U 2063 0 A 2083 0 C 2084
0 C 2086 0 C 2087 0 U 2550 0 G 2558 0 C 2651 0 U
2652 0 A 2653 0 C 2654 0 U 2655 0 G 2657 0 A 2677
0 A 2678 0 G 2679 0 A 2680 0 A 2681 0 G 2683 0 A
2684 0 C 2685 0 U 2705 0 A 2706 0 C 2707 0 C 2769
0 A 2800 0 A 2801 0 C 2802 0 C 2803 0 C 2804 0 A
2805 0 G 2809 0 A 2813 0
13 2.38 2.38 178.6 -0.74 -0.75 6.9 83 4 4 2 0 0 1 0  C 541 0 A 542 0 G 543 0 C 558 0 U 559 0 G 561 0 A
562 0 C 563 0 G 564 0 A 590 0 A 591 0 G 592 0 A
593 0 C 594 0 G 740 0 C 741 0 C 910 0 G 911 0 G
928 0 A 929 0 C 930 0 C 931 0 U 932 0 C 933 0 A
943 0 A 1032 0 C 1033 0 G 1034 0 C 1035 0 G 1036
0 G 1037 0 G 1087 0 A 1088 0 G 1089 0 A 1090 0 U
1091 0 A 1092 0 G 1093 0 G 1260 0 A 1261 0 C 1262
0 C 1263 0 U 1264 0 U 1288 0 C 1289 0 G 1290 0 A
2395 0 C 2396 0 G 2397 0 A 2398 0 A 2430 0 C 2431
0 C 2432 0 U 2435 0 U 2436 0 A 2437 0 C 2439 0 G
2451 0 G 2452 0 G 2453 0 C 2454 0 A 2455 0 A 2456
0 SR 8983 0
14 1.92 2.07 184.9 -1.18 -0.71 13.3 85 9 4 4 5 0 0 0  G 17 0 C 18 0 U 19 0 G 20 0 G 21 0 U 22 0 G 24 0
U 55 0 C 58 0 A 59 0 A 67 0 A 69 0 A 497 0 G 499
0 U 510 0 G 512 0 A 513 0 G 514 0 C 515 0 G 518 0
A 519 0 A 520 0 A 521 0 U 522 0 U 555 0 C 556 0 C
557 0 U 595 0 C 596 0 A 597 0 C 598 0 G 607 0 A
608 0 U 609 0 G 610 0 G 1322 0 G 1323 0 G 1324 0
C 1326 0 A 1424 0 A 1427 0 G 1441 0 A 1442 0 G
1443 0 G 1444 0 SR 8973 0 NA 8510 S MG 8086 Y
15 1.32 1.32 190.0 -0.47 -0.80 4.3 80 1 1 0 0 0 0 0  A 542 0 G 543 0 C 558 0 U 559 0 G 561 0 A 562 0 C
563 0 G 564 0 A 590 0 A 591 0 G 592 0 A 593 0 C
594 0 G 615 0 U 616 0 G 1076 0 G 1077 0 A 1092 0
G 1093 0 G 1100 0 U 1101 0 C 1105 0 A 1106 0 G
1119 0 U 1120 0 G 1121 0 U 1122 0 A 1123 0 A 1124
0 G 1131 0 G 1226 0 C 1227 0 C 1228 0 C 1229 0 A
1230 0 A 1231 0 G 1239 0 A 1248 0 U 1249 0 C 1250
0 G 1258 0 A 1259 0 U 2499 0 C 2500 0 A 2553 0 U
2554 0 C 2555 0 C 2556 0 U 2557 0 C 2560 0 C 2565
0 A 2566 0 G 2567 0 A 2568 0 A 2569 0 G 2570 0 C
2571 0 G 2572 0 G 2573 0 G 2574 0 C 2575 0 A 2776
0 MG 8053 0 G 88 9 C 89 9 G 90 9 C 91 9
16 1.24 1.23 187.1 -1.27 -0.68 15.8 82 8 6 2 5 0 1 0  C 18 0 U 19 0 G 20 0 U 55 0 C 58 0 A 59 0 A 67 0
A 69 0 U 488 0 A 497 0 A 498 0 G 499 0 G 500 0 G
501 0 A 502 0 G 503 0 A 509 0 U 510 0 U 548 0 A
549 0 C 550 0 A 551 0 A 552 0 G 553 0 G 554 0 G
604 0 G 1322 0 G 1323 0 G 1337 0 U 1338 0 A 1424
0 A 1427 0 G 1441 0 A 1442 0 G 1443 0 G 1444 0 SR
8925 0 NA 8510 S
17 2.20 2.18 187.5 -1.13 -0.78 11.8 84 7 7 4 0 0 2 0  G 33 0 U 35 0 G 50 0 U 63 0 G 77 0 G 78 0 G 79 0
C 101 0 A 102 0 A 151 0 C 153 0 A 174 0 U 176 0 A
177 0 C 208 0 G 213 0 U 214 0 U 224 0 G 225 0 C
301 0 A 302 0 C 303 0 G 304 0 A 305 0 A 306 0 C
344 0 G 345 0 C 440 0 A 441 0 A 442 0 C 443 0 C
444 0 U 445 0 G 458 0 A 459 0 G 464 0 U 647 0 G
648 0 U 649 0 C 650 0 U 651 0 G 740 0 C 741 0 G
742 0 A 758 0 C 759 0 G 1037 0 G 2397 0 A 2398 0
A 2430 0 C 2431 0 C 2432 0 U 2435 0 U 2436 0 A
2437 0 C 2439 0 G 2451 0 G 2452 0 G 2453 0 C 2454
0 A 2455 0 A 2456 0
18 2.29 2.29 194.8 -0.84 -0.73 7.2 91 7 0 5 1 0 0 0  U 555 0 C 556 0 C 557 0 U 595 0 C 596 0 A 597 0 C
598 0 G 607 0 A 608 0 U 609 0 A 635 0 G 636 0 C
638 0 A 639 0 G 640 0 U 825 0 G 828 0 G 830 0 U
831 0 C 839 0 U 845 0 A 846 0 C 847 0 C 848 0 C
849 0 U 850 0 C 1320 0 A 1321 0 G 1323 0 G 1324 0
G 1325 0 C 1326 0 G 1331 0 C 1332 0 U 1333 0 A
1355 0 A 1356 0 A 1357 0 C 1360 0 C 1361 0 U 1362
0 G 1363 0 G 1364 0 C 1365 0 G 1378 0 A 1379 0 A
1407 0 A 1712 0 G 1713 0 G 1739 0 U 1740 0 G 1756
0 U 1757 0 U 1758 0 A 1759 0 A 1815 0 C 1816 0 U
1817 0 G 1837 0 U 1838 0 C 2056 0 A 2099 0 A 2100
0 C 2644 0 U 2645 0 G 2646 0 C 2752 0 G 2753 0 MG
8049 0 NA 8569 0 SR 8937 0 SR 8965 0
19 1.40 1.40 203.2 -1.04 -0.74 10.3 85 11 2 5 1 0 1 0  G 17 0 C 18 0 U 19 0 G 20 0 G 21 0 U 22 0 G 24 0
C 31 0 C 62 0 U 63 0 G 77 0 G 78 0 G 79 0 C 85 0
A 86 0 C 101 0 A 102 0 C 301 0 A 302 0 C 303 0 G
304 0 A 305 0 A 306 0 C 344 0 G 345 0 C 444 0 U
445 0 C 461 0 A 462 0 G 479 0 C 480 0 U 510 0 G
512 0 A 513 0 G 514 0 C 515 0 G 518 0 A 519 0 A
520 0 A 521 0 U 522 0 U 555 0 C 556 0 C 557 0 U
595 0 C 596 0 A 597 0 C 598 0 G 607 0 A 608 0 U
609 0 G 610 0 G 1322 0 G 1323 0 G 1324 0 C 1326 0
A 1427 0 SR 8973 0 MG 8086 Y
20 2.19 2.19 201.8 -1.06 -0.75 9.8 88 11 1 5 1 0 0 0  U 555 0 C 556 0 C 557 0 U 595 0 C 596 0 A 597 0 C
598 0 G 607 0 A 608 0 U 609 0 A 635 0 G 636 0 C
638 0 A 639 0 G 640 0 A 767 0 U 768 0 C 769 0 C
770 0 G 771 0 G 772 0 A 773 0 A 844 0 U 866 0 A
867 0 G 868 0 G 869 0 U 883 0 C 884 0 G 887 0 U
888 0 C 889 0 C 1320 0 A 1321 0 G 1323 0 G 1324 0
G 1325 0 C 1326 0 G 1331 0 C 1332 0 U 1333 0 A
1355 0 A 1356 0 A 1357 0 C 1360 0 C 1361 0 U 1362
0 G 1363 0 G 1364 0 C 1365 0 A 1458 0 A 1459 0 G
1460 0 U 1461 0 C 1474 0 G 1475 0 A 1476 0 C 1477
0 U 1478 0 G 1479 0 A 1657 0 A 1658 0 G 1837 0 C
1862 0 G 1863 0 C 1872 0 C 2056 0 U 2478 0 MG
8049 0
21 2.12 2.13 218.9 -1.16 -0.59 14.5 85 8 5 4 3 1 1 0  C 31 0 C 58 0 C 62 0 U 63 0 G 77 0 G 78 0 G 79 0
C 85 0 A 86 0 C 101 0 A 102 0 C 301 0 A 302 0 C
303 0 G 304 0 A 305 0 A 306 0 C 344 0 G 345 0 C
444 0 U 445 0 C 461 0 A 462 0 G 479 0 C 480 0 A
497 0 G 514 0 A 1424 0 G 1441 0 A 1442 0 G 1443 0
G 1449 0 G 1498 0 C 1508 0 U 1509 0 G 1510 0 U
1511 0
22 1.37 1.41 234.5 -1.04 -0.67 13.0 82 6 7 2 3 2 1 0  C 18 0 U 19 0 G 20 0 C 58 0 U 488 0 A 497 0 A 498
0 G 499 0 G 500 0 G 501 0 A 502 0 G 503 0 A 509 0
U 510 0 U 548 0 A 549 0 C 550 0 A 551 0 A 552 0 G
553 0 G 554 0 G 604 0 G 1322 0 G 1323 0 G 1337 0
U 1338 0 A 1424 0 A 1427 0 G 1441 0 A 1442 0 G
1443 0 G 1449 0 G 1498 0 C 1508 0 U 1509 0 G 1510
0 U 1511 0 SR 8925 0
23 1.92 1.93 237.1 -0.91 -0.80 9.6 80 4 6 1 0 1 1 0  U 146 0 G 147 0 A 148 0 G 149 0 G 150 0 C 153 0 C
154 0 C 155 0 A 174 0 G 175 0 U 176 0 A 177 0 U
178 0 C 179 0 G 180 0 G 181 0 G 182 0 A 183 0 C
208 0 G 213 0 U 214 0 U 224 0 G 225 0 C 440 0 G
564 0 A 565 0 U 647 0 G 648 0 U 649 0 C 650 0 U
651 0 C 741 0 G 742 0 A 758 0 C 759 0 U 909 0 G
928 0 A 929 0 C 930 0 C 931 0 U 932 0 C 933 0 C
934 0 G 1031 0 A 1032 0 C 1033 0 G 1034 0 C 1035
0 G 1036 0 G 1037 0 U 1266 0 C 1267 0 C 1268 0 G
1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279 0 A 1280
0 C 1281 0 U 1282 0 G 1283 0 G 1284 0 U 1285 0 A
1458 0 A 1459 0 G 1460 0 U 1461 0 C 1462 0 U 1463
0 C 1464 0 A 1465 0 C 1466 0 C 1467 0 C 1472 0 U
1473 0 C 1474 0 G 1475 0 A 1476 0 C 1477 0 U 1478
0 G 1479 0 A 1657 0 A 1658 0 C 1872 0 A 2395 0 C
2396 0 SR 8908 0 SR 8952 1
24 2.41 2.41 232.4 -0.98 -0.71 10.9 85 7 5 4 3 1 0 0  G 17 0 C 18 0 U 19 0 G 20 0 G 21 0 U 22 0 G 24 0
C 58 0 A 497 0 G 499 0 U 510 0 G 512 0 A 513 0 G
514 0 C 515 0 G 518 0 A 519 0 A 520 0 A 521 0 U
522 0 U 555 0 C 556 0 C 557 0 U 595 0 C 596 0 A
597 0 C 598 0 G 607 0 A 608 0 U 609 0 G 610 0 G
1322 0 G 1323 0 G 1324 0 C 1326 0 A 1424 0 A 1427
0 G 1441 0 A 1442 0 G 1443 0 G 1449 0 G 1498 0 C
1508 0 U 1509 0 G 1510 0 U 1511 0 SR 8973 0 MG
8086 Y
25 1.61 1.62 238.0 -1.00 -0.80 10.5 84 6 8 4 0 0 1 0  G 33 0 U 35 0 G 50 0 U 63 0 G 77 0 G 78 0 G 79 0
C 101 0 A 102 0 A 151 0 C 153 0 A 174 0 G 175 0 U
176 0 A 177 0 C 208 0 G 213 0 U 214 0 U 224 0 G
225 0 C 301 0 A 302 0 C 303 0 G 304 0 A 305 0 A
306 0 C 344 0 G 345 0 C 440 0 A 441 0 A 442 0 C
443 0 C 444 0 U 445 0 G 458 0 A 459 0 G 464 0 G
564 0 A 565 0 U 647 0 G 648 0 U 649 0 C 650 0 U
651 0 C 741 0 G 742 0 A 758 0 C 759 0 U 909 0 G
928 0 A 929 0 C 930 0 C 931 0 U 932 0 C 933 0 C
934 0 G 1031 0 A 1032 0 C 1033 0 G 1034 0 C 1035
0 G 1036 0 G 1037 0 U 1266 0 C 1267 0 C 1268 0 G
1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279 0 A 1280
0 C 1281 0 U 1282 0 G 1283 0 G 1284 0 U 1285 0 A
2395 0 C 2396 0
26 2.18 2.18 269.9 -0.80 -0.82 7.7 83 1 6 3 0 0 0 0  C 197 0 A 198 0 A 199 0 U 211 0 A 212 0 U 214 0 A
215 0 A 383 0 G 384 0 C 385 0 C 405 0 G 406 0 A
407 0 C 414 0 A 415 0 G 416 0 C 418 0 A 419 0 U
420 0 C 421 0 G 564 0 A 565 0 U 651 0 G 652 0 C
685 0 A 686 0 G 689 0 G 690 0 G 691 0 C 695 0 C
741 0 G 742 0 U 909 0 G 928 0 A 929 0 C 930 0 C
931 0 U 932 0 C 933 0 C 934 0 G 1031 0 A 1032 0 C
1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 U 1266
0 C 1267 0 C 1268 0 G 1269 0 U 1270 0 A 1271 0 C
1272 0 U 1279 0 A 1280 0 C 1281 0 U 1282 0 G 1283
0 G 1284 0 U 1285 0 A 1912 0 C 1913 0 C 1920 0 A
1921 0 C 1928 0 G 1929 0 A 1930 0 U 2129 0 C 2130
0 G 2131 0 U 2133 0 G 2134 0 A 2135 0 G 2136 0 G
2237 0 A 2238 0 C 2239 0 A 2258 0 C 2259 0 A 2395
0 C 2396 0 U 2441 0 G 2442 0 C 2443 0 U 2445 0 G
2446 0 A 2447 0 U 2448 0 SR 8938 0
27 1.37 1.36 274.6 -0.98 -0.73 10.4 83 9 4 4 3 0 1 0  C 18 0 U 19 0 G 20 0 U 22 0 G 23 0 A 466 0 G 467
0 A 476 0 U 488 0 G 500 0 G 501 0 A 502 0 G 503 0
A 509 0 U 510 0 G 512 0 A 513 0 G 514 0 C 515 0 U
548 0 A 549 0 C 550 0 A 551 0 A 552 0 G 553 0 G
554 0 G 604 0 U 845 0 G 1322 0 G 1323 0 G 1337 0
U 1338 0 A 2099 0 A 2100 0 A 2103 0 A 2486 0 C
2487 0 C 2496 0 A 2497 0 C 2498 0 U 2499 0 U 2527
0 U 2528 0 A 2538 0 G 2540 0 U 2541 0 C 2542 0 C
2555 0 C 2556 0 U 2557 0 C 2560 0 C 2565 0 A 2566
0 G 2567 0 A 2568 0 A 2569 0 G 2570 0 C 2571 0 G
2572 0 G 2573 0 U 2590 0 C 2591 0 G 2592 0 G 2603
0 A 2604 0 C 2608 0 G 2618 0 UR3 2619 0 U 2620 0
A 2637 0 C 2644 0 U 2645 0 G 2646 0 MG 8053 0 SR
8919 0 SR 8925 0
28 1.19 1.19 274.1 -1.08 -0.82 12.2 85 4 12 3 2 0 0 0  U 35 0 G 44 0 U 46 0 A 49 0 G 50 0 U 63 0 G 64 0
C 65 0 C 103 0 A 104 0 G 105 0 A 106 0 U 107 0 U
108 0 A 151 0 C 153 0 A 174 0 G 175 0 U 176 0 A
177 0 C 208 0 G 213 0 U 214 0 U 224 0 G 225 0 C
440 0 A 441 0 A 442 0 C 443 0 G 458 0 A 459 0 G
464 0 G 564 0 A 565 0 U 647 0 G 648 0 U 649 0 C
650 0 U 651 0 C 741 0 G 742 0 A 758 0 C 759 0 U
909 0 G 928 0 A 929 0 C 930 0 C 931 0 U 932 0 C
933 0 C 934 0 G 1031 0 A 1032 0 C 1033 0 G 1034 0
C 1035 0 G 1036 0 G 1037 0 U 1266 0 C 1267 0 C
1268 0 G 1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279
0 A 1280 0 C 1281 0 U 1282 0 G 1283 0 G 1284 0 U
1285 0 A 2395 0 C 2396 0 NA 8525 0
29 1.59 1.61 290.5 -1.07 -0.69 10.9 85 11 2 7 3 0 1 0  C 31 0 C 62 0 U 63 0 G 77 0 G 78 0 G 79 0 C 85 0
A 86 0 C 101 0 A 102 0 C 301 0 A 302 0 C 303 0 G
304 0 A 305 0 A 306 0 C 344 0 G 345 0 C 444 0 U
445 0 C 461 0 A 462 0 A 466 0 G 467 0 A 476 0 G
479 0 C 480 0 G 514 0 U 845 0 A 1427 0 C 1428 0 A
2099 0 A 2100 0 A 2103 0 A 2486 0 C 2487 0 C 2496
0 A 2497 0 C 2498 0 U 2499 0 U 2527 0 U 2528 0 A
2538 0 G 2540 0 U 2541 0 C 2542 0 C 2555 0 C 2556
0 U 2557 0 G 2558 0 C 2560 0 A 2569 0 G 2570 0 C
2571 0 G 2572 0 G 2573 0 U 2590 0 C 2591 0 G 2592
0 G 2603 0 A 2604 0 C 2608 0 G 2618 0 UR3 2619 0
U 2620 0 A 2637 0 C 2644 0 U 2645 0 G 2646 0 C
2685 0 C 2686 0 A 2703 0 C 2704 0 U 2705 0 A 2706
0 C 2707 0 C 2769 0 SR 8919 0
30 2.20 2.24 318.8 -0.95 -0.78 10.2 88 7 9 5 2 0 1 0  G 33 0 U 35 0 G 50 0 U 63 0 G 77 0 G 78 0 G 79 0
C 101 0 A 102 0 A 151 0 C 153 0 A 174 0 U 176 0 A
177 0 C 208 0 G 213 0 U 214 0 U 224 0 G 225 0 C
301 0 A 302 0 C 303 0 G 304 0 A 305 0 A 306 0 C
344 0 G 345 0 C 440 0 A 441 0 A 442 0 C 443 0 C
444 0 U 445 0 G 458 0 A 459 0 G 464 0 U 647 0 G
648 0 U 649 0 C 650 0 U 651 0 C 741 0 G 742 0 A
758 0 C 759 0 A 913 0 A 914 0 C 915 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 A 943 0 G 956 0 A
957 0 C 1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037
0 G 1046 0 U 1047 0 G 1048 0 C 1049 0 G 1050 0 C
1051 0 G 1052 0 G 1055 0 C 1060 0 U 1062 0 G 1063
0 U 1064 0 G 1065 0 U 1066 0 A 1133 0 G 1135 0 U
1136 0 G 1137 0 C 1153 0 A 1154 0 C 1208 0 U 1218
0 U 1219 0 U 1220 0 G 1221 0 A 1222 0 G 1223 0 G
1224 0 A 2395 0 C 2396 0 NA 8544 0 A 80 9 C 81 9
G 92 9 A 93 9 G 94 9 C 95 9 C 96 9
31 1.17 1.17 30.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1162 0 G 1165 0 A 1173 0 A 1174 0 G 1175 0 C
1176 0 A 1177 0 G 1197 0 U 1198 0 A 1200 0 C 1201
0 A 1202 0 G 1203 0
32 1.92 2.76 31.6 -0.50 -0.74 3.2 58 0 0 0 0 0 1 0  G 1162 0 G 1163 0 U 1164 0 G 1165 0 A 1174 0 G
1175 0 C 1183 0 C 1184 0 U 1185 0 G 1190 0 A 1191
0 A 1192 0 A 1193 0 A 1202 0

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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