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PDBsum entry 3cad

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 3cad calculated with MOLE 2.0 PDB id
3cad
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.03 2.45 51.3 0.34 0.32 7.9 68 3 1 1 4 3 1 0  
2 1.47 1.52 53.9 -2.37 -0.53 25.1 86 5 2 5 3 0 0 0  
3 1.40 1.58 55.2 -0.27 -0.11 12.9 77 4 2 4 4 1 0 4  
4 1.56 1.75 67.2 -0.54 -0.09 18.0 77 6 4 5 6 1 0 4  
5 1.72 1.75 68.0 -0.43 0.08 13.0 71 5 2 2 5 2 1 0  
6 1.26 1.27 80.6 -1.10 -0.42 19.5 83 5 5 3 4 1 0 2  
7 1.27 1.27 83.7 -1.33 -0.41 19.0 82 5 4 5 4 2 0 2  
8 1.39 1.39 83.9 -0.92 -0.16 14.3 78 5 4 5 6 2 1 0  
9 1.28 1.28 95.6 -1.26 -0.33 21.0 82 7 6 6 6 2 0 2  
10 1.28 1.30 115.0 -0.74 -0.21 15.4 77 6 7 5 9 4 1 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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