PDBsum entry 3c9c Go to PDB code:  Tunnel analysis for: 3c9c calculated with MOLE 2.0 PDB id 3c9c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.25 21.7 -1.06 -0.54 5.8 79 1 1 5 3 1 2 1  CD 434 A CD 435 A 2 1.25 1.25 21.9 -0.92 -0.21 15.0 74 1 3 2 1 2 0 1  CD 434 A 3 1.35 1.53 20.0 -0.52 -0.25 19.6 82 2 3 2 3 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.